Pan Asian Population Genomics Initiative Concept Paper

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Contents

The Pan Asian Population Genomics Initiative

(This is a Draft Manuscript under preparation. All Authenticated Participants could modify the manuscript in real-time)

Authors

Affiliations

Introduction

Overview of Whole Genome Sequencing

Personal Genomes

Country-level Personal Genome Projects

Overview of what Personal Genomes could reveal

Personal genomes at a population level

Collaborative Framework for Personal Genomes at population level

What we learned form collaborating in PASNPI

Data Analysis and Framework for Integrating Data

Challenges and Constraints

Ethical and Regulatory Issues

Open Collaborative Projects

Conclusions and Future Perspective

 

Acknowledgements

References

 

Ngamphiw C, Assawamakin A, Xu S, Shaw PJ, Yang JO, Ghang H, Bhak J, Liu E, Tongsima S and the HUGO Pan- Asian SNP Consortium.PanSNPdb: The Pan-Asian SNP Genotyping Database. PLoS One. 2011 June 23, 6(6): e21451.

Hatin WI, Nur-Shafawati AR, Zahri MK, Xu S, Jin L, Tan SG, Rizman-Idid M, Zilfalil BA; The HUGO Pan-Asian SNP Consortium.Population genetic structure of peninsular Malaysia Malay sub-ethnic groups. PLoS One. 2011 Apr 5;6(4):e18312.

Xu S, Kangwanpong D, Seielstad M, Srikummool M, Kampuansai J, Jin L; The HUGO Pan-Asian SNP Consortium.Genetic evidence supports linguistic affinity of Mlabri--a hunter-gatherer group in Thailand. BMC Genet. 2010 Mar 19;11:18.

The HUGO Pan-Asian SNP Consortium, Abdulla MA, Ahmed I, Assawamakin A, Bhak J, Brahmachari SK, Calacal GC, Chaurasia A, Chen CH, Chen J, Chen YT, Chu J, Cutiongco-de la Paz EM, De Ungria MC, Delfin FC, Edo J, Fuchareon S, Ghang H, Gojobori T, Han J, Ho SF, Hoh BP, Huang W, Inoko H, Jha P, Jinam TA, Jin L, Jung J, Kangwanpong D, Kampuansai J, Kennedy GC, Khurana P, Kim HL, Kim K, Kim S, Kim WY, Kimm K, Kimura R, Koike T, Kulawonganunchai S, Kumar V, Lai PS, Lee JY, Lee S, Liu ET, Majumder PP, Mandapati KK, Marzuki S, Mitchell W, Mukerji M, Naritomi K, Ngamphiw C, Niikawa N, Nishida N, Oh B, Oh S, Ohashi J, Oka A, Ong R, Padilla CD, Palittapongarnpim P, Perdigon HB, Phipps ME, Png E, Sakaki Y, Salvador JM, Sandraling Y, Scaria V, Seielstad M, Sidek MR, Sinha A, Srikummool M, Sudoyo H, Sugano S, Suryadi H, Suzuki Y, Tabbada KA, Tan A, Tokunaga K, Tongsima S, Villamor LP, Wang E, Wang Y, Wang H, Wu JY, Xiao H, Xu S, Yang JO, Shugart YY, Yoo HS, Yuan W, Zhao G, Zilfalil BA; Indian Genome Variation Consortium.Mapping Human Genetic Diversity in Asia. Science 326, 1541 (2009).

 

 

 

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